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The Ship Missile allows Samus's gunship to fire missiles at a ground target using the Command Visor. This can be used to destroy objects made of Maldium, or to damage all enemies in an open area. The Ship Missile begins with 3 missiles, and can be expanded using Ship Missile Expansions to fire up to 11 missiles. Ship Missiles can only be found in Metroid Prime 3: Corruption.
Ship Missiles are most used in Bryyo for destroying the two Seed Shield Generators and in some areas of the Pirate Homeworld. Though its capable of killing any kind of enemy on a single bombing run, this weapon cannot damage creatures in Hypermode or Space Pirates with their shields up.
| Missiles |
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| Missile Launcher | Missile | Super Missile | Ice Missile | Diffusion Missile Charge Combo | Seeker Missile | Hyper Missile Ship Missile | Homing Missile | Storm Missile Relentless Missile | Turbo Missile | Missile Key |